FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l01n02_osat_150.3520000008ced7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l01n02_osat_150.3520000008ced7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9006792
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGAGGT64050.023.8081824
GAGGTGT68350.022.4492536
CTGACCT34600.022.3795744
TAGACCT34450.021.6496434
CCAGCGT30100.021.1466928
TATACTG60900.021.1393835
CTAACCT43150.021.0277544
CAGCGTG37750.020.761179
TACACTG41600.020.5550965
TCAGAGG55500.020.4572683
TAAGGCT42300.019.990334
AGAGGTG81400.019.9591485
TTGACCT53200.019.7342644
CTACCCT36400.019.7067894
CTACACT44000.019.649844
GGACTGT30750.019.6198886
TACCCTG33200.019.4599235
TTACACT55900.019.3759654
AGTACTG51500.019.3710165
TTAACCT54150.019.1248654
Produced by FastQC (version 0.11.2)