FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l01n01_osat_150.3510000008ceda.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l01n01_osat_150.3510000008ceda.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9006792
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGAGGT62550.027.1860584
GAGGTGT72050.024.7874776
AGAGGTG85750.022.4342425
CTGTGCG21850.022.171919
TAGACCT34550.021.8594684
TAAGGCT43400.021.5609054
TATACTG60450.021.3728835
AGGTGTA62450.021.0669527
CAGACCT24200.020.8056354
TCAGAGG54600.020.531333
TAGACTG29400.020.5185625
ACTGTGC45850.020.5106878
CTAACCT45150.020.3043964
TACACTG43700.020.2172475
TTACACT56150.020.0488324
GGTGTAC57500.019.9894968
TTAACCT57700.019.8395464
CAGAGTA54000.019.526019
CTACACT48000.019.3956954
CAGACCC21150.019.3142834
Produced by FastQC (version 0.11.2)