FastQCFastQC Report
Tue 20 Dec 2016
C9LUFACXX_l08n01_137.35100000073c10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUFACXX_l08n01_137.35100000073c10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12841207
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG99650.022.4963825
CTATACT129500.020.942144
TTATACT152150.019.8536284
ACTGTGC62150.019.7165818
TAATACT152050.019.648034
TAGACTG43500.019.4347385
GTATAGG81050.019.165441
CTGTGCG30400.018.9044849
ATACTGT95800.018.7899996
ATAATAC123950.018.1630273
CCTATAC87300.018.1170043
TACACTG61100.018.1118455
TATACAG89250.017.933695
GTATTGG84200.016.8123441
ACTGCGC23250.016.7511238
GGACTGT41450.016.7294396
TATACCG42350.016.5980195
ACTGTGT71450.016.5519898
ATTATAC130250.016.4458083
TAGGACT54650.016.4257954
Produced by FastQC (version 0.11.2)