FastQCFastQC Report
Tue 20 Dec 2016
C9LUFACXX_l07n01_32.35100000073bdb.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUFACXX_l07n01_32.35100000073bdb.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61629310
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG382700.016.7028985
CTATACT381100.015.1409744
GTATTGG496350.014.6258821
GTATAGG267150.014.5473831
TTATACT480800.014.5200944
TATACAG348250.014.4823365
GTATAAG275300.014.4273581
GTATATA831850.014.227071
GTATTAT457750.014.2089451
TATACCG198150.014.0445815
TAATACT490500.013.7391514
ATTATAC444500.013.6228173
ACTGTGC264150.013.5930968
CCTATAC274900.013.3546733
GTATTAG292450.013.2076531
TAGACTG203700.013.1956455
TACACTG280250.013.0312475
ATAATAC451950.012.967413
TACACCG191900.012.274735
ATGCCGT756200.012.21142994-95
Produced by FastQC (version 0.11.2)