C99B1ACXX_l06n01_nutrinetat_vegc65_shahdara_r2y_hn.35100000089f19.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C99B1ACXX_l06n01_nutrinetat_vegc65_shahdara_r2y_hn.35100000089f19.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23833156
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGGCGATCTCGTATGCC	363837	1.5266001699481178	TruSeq Adapter, Index 7 (97% over 36bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAG	38144	0.16004594607613024	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTA	24109	0.10115739602426133	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	39950	42.49475	45
CCAGGCG	40105	42.24278	33
CAGGCGA	40050	42.182854	34
ACGTCTG	40950	42.03023	15
GCACACG	41410	41.737152	11
AGGCGAT	40645	41.421455	35
CACACGT	41840	41.29746	12
CGTATGC	41240	41.16199	44
ACACGTC	42170	40.883614	13
ACCAGGC	41555	40.82805	32
AGCACAC	42390	40.788166	10
TCGTATG	41665	40.76912	43
GGCGATC	41325	40.669117	36
CTCGTAT	41900	40.524357	42
CACGTCT	42985	40.09276	14
GAGCACA	43515	39.749172	9
CGTCTGA	43435	39.646313	16
TCGGAAG	43800	39.33128	3
GCGATCT	43120	39.054382	37
CAGTCAC	44195	38.683853	27