FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l08n02_175.3520000006b153.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l08n02_175.3520000006b153.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34690546
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG198450.023.637451
CCTATAC222300.020.857763
CTATACT263900.020.7921754
TATAGGG196150.018.3609262
CCCTATA210150.017.4090482
TATACTA355400.017.016135
TATACTG194050.016.4759795
GTATTGG220100.015.0935581
GTATATA428150.014.8967351
TATACCG108350.014.6881035
TATACAG190600.014.6556225
TACACAG146950.014.4183335
TCCCTAT230250.014.3456321
TACTAAC241800.014.3009477
TCTATAC161500.014.2962143
TAATACT246800.014.2636394
TACACCG106900.014.0874185
TACACTG157900.013.9900945
GTGTAAG105900.013.8225851
ACTGTGC152050.013.80775458
Produced by FastQC (version 0.11.2)