FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l08n01_175.3510000006b156.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l08n01_175.3510000006b156.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34690546
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG203650.021.4199731
CCTATAC222050.020.768943
CTATACT270700.020.7556694
TATACTG195650.018.4236345
TATAGGG199050.017.3712372
CCCTATA212350.017.2002832
TATACTA357600.016.5077155
TATACCG102800.015.6148195
TACACTG155750.015.0020445
TATACAG188150.014.9685
TAGACTG119250.014.8148725
GTATATA434650.014.6605321
GTATTGG214200.014.5749331
TACTAAC246350.013.9186787
TACACCG115150.013.8988635
CTACACT157000.013.8247364
GTGTAGG145250.013.8056541
ATACTAA302050.013.78904156
TACACAG142600.013.7544695
GTATTAT233000.013.7456291
Produced by FastQC (version 0.11.2)