FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l08n01_172.3510000006b070.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l08n01_172.3510000006b070.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20909489
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG120150.022.3858321
CTATACT154550.019.6372534
CCTATAC128650.019.123843
TATAGGG114850.017.3695262
TATACTG121500.016.8077225
TAGACTG71300.016.0525575
TATACAG122950.015.95284755
CCCTATA127450.015.9132072
TACACTG96550.015.7403515
TTATACT155950.015.562684
TATACTA214200.015.5201275
CTACACT98600.015.3660644
GTATTAG94550.014.7763221
TAATACT159450.014.5359764
TAGACAG66550.014.4865415
TACACAG93550.014.4683085
GTATATA281050.014.4057731
GTATTAT144300.014.2594291
ACTGTGC97750.014.1867468
GTATTGG132450.014.1000661
Produced by FastQC (version 0.11.2)