FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l08n01_168.3510000006b013.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l08n01_168.3510000006b013.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37554210
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACT284550.021.5646444
GTATAGG238350.021.152511
CCTATAC255650.019.5626343
TATACTG211850.019.4582425
TATACCG120450.018.0580565
TATACTA389100.017.25845
TAATACT288900.017.014974
CCCTATA230750.016.7137152
TAGACTG122150.016.523725
TTATACT286850.016.4742854
TATAGGG224000.016.390422
GTATTAT263650.016.3471151
GTATATA512150.016.1533741
GTATAAT262900.015.6346151
ATAATAC252050.015.5646063
TATACAG205600.015.4992895
ACTGTGC163500.015.4237198
ATTATAC257300.015.2470223
TAGACAG125050.015.0011915
TACACTG172100.014.9841235
Produced by FastQC (version 0.11.2)