FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l07n02_129.3520000006afec.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l07n02_129.3520000006afec.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22783260
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG163250.022.7871575
TTATACT211800.020.70564
GTATAGG118650.019.8316751
CTATACT174150.019.3162084
TAATACT202400.019.2493214
TAGACTG84600.019.0937025
GTATTAT184800.018.4175971
ACTGTGC117400.017.4791018
GTATTAG118850.017.3185141
GTATATA356800.017.2797341
TCTATAC125350.017.1706943
ATTATAC183000.017.0839713
ATAATAC181000.017.0627383
ATACTGT165800.017.0468986
GTATTGG168100.016.5993961
GTATAAG111150.016.4654331
CCTATAC122400.016.3811743
TATACAG150800.016.1620925
TACACTG115550.015.9941535
TATACTT209550.015.983915
Produced by FastQC (version 0.11.2)