FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l07n01_133.3510000006b0c0.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l07n01_133.3510000006b0c0.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37326684
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG251450.020.0965585
TTATACT403200.017.3633544
CTATACT320200.017.10274
TAATACT433450.016.7104264
TACACTG175900.016.605085
CTGTGCG81400.016.395069
TTACACT233100.016.2395024
CTACACT176550.016.222074
TAGACTG123950.016.1695385
TAAGACT180650.015.9590644
ATACTGT273650.015.8975836
ACTGTGC168900.015.8872928
GTATAGG204350.015.8594721
CTGTACT216850.015.5070974
CTACCCT135350.015.4752264
CTGTGCA267200.015.4459419
ACTGTGT204500.015.2814198
CCTGTGC160500.015.2392398
GTATTGG244900.014.9992551
CCTATAC214600.014.9839223
Produced by FastQC (version 0.11.2)