FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l07n01_132.3510000006b063.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l07n01_132.3510000006b063.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23647365
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG153400.022.0572341
CTATACT193100.020.5135774
CCTATAC161550.019.8455723
TATACTG148350.019.7208255
TATAGGG151000.017.7406272
GTATTAT167000.016.846191
TATACCG80750.016.5270635
TATACTA260300.016.2020785
TAATACT186900.016.1623864
CCCTATA154350.016.1554662
TTATACT183450.016.0003094
GTATATA330700.015.9796431
ACTGTGC112900.015.9011618
TAGACTG81850.015.3765585
ATAATAC162950.015.3611263
TATACAG142550.015.3590945
ATTATAC167350.014.8721033
GTATTAG112250.014.6906021
GTATAAT170850.014.6585871
GTATAAG110000.014.6454761
Produced by FastQC (version 0.11.2)