FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l07n01_129.3510000006afef.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l07n01_129.3510000006afef.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22783260
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG164850.021.8672565
CTATACT177200.020.45154
TTATACT202950.019.448064
TAATACT204300.018.9243224
TAGACTG84800.018.4264415
TATACAG155700.018.0582055
ACTGTGC112550.017.8498828
GTATTAT191450.017.7220521
GTATAGG122300.017.6012271
ATACTGT165200.017.59476
GTATAGA135200.017.468311
GTATAAG117900.017.4520031
TCTATAC130350.017.1991023
ATTATAC182600.016.8037623
TATACCG83100.016.6315775
ATAATAC181700.016.5994473
CCTATAC124700.016.0738833
GTATAAT197650.016.0361521
GTATTGG167000.016.0200231
TAGACAG84300.016.000455
Produced by FastQC (version 0.11.2)