FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l06n02_118.3520000006b32a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l06n02_118.3520000006b32a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19235300
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG119150.020.2235935
GTATAGG90400.018.7775331
CTATACT123550.018.0805134
TTATACT149650.017.4996994
TAATACT152550.016.3881244
TATACAG110250.016.338235
TATACCG65150.015.7573695
GTATATA266800.015.7366981
GTATAAG82550.015.667171
ACTGTGC85200.015.5537318
TAGACTG66150.015.5191625
TCTATAC92900.015.4512593
GTATAAT140750.015.2696391
GTATTAT143750.015.2486651
CCTATAC90050.014.9901943
ATTATAC137150.014.8327123
GTATAGA100800.014.7646281
ATACTGT134400.014.6317746
TATACTA177350.014.3372875
ATAATAC139950.014.2982153
Produced by FastQC (version 0.11.2)