FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l06n02_116.3520000006b288.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l06n02_116.3520000006b288.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18305124
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG112950.016.7893715
CTATACT125250.016.6211874
GTATAGG92650.015.9609041
TAATACT144250.015.0579564
TTATACT149750.014.8857824
CCTATAC92900.014.5816493
GTATAGA100100.014.2504881
GTATATA255050.013.8517941
GTATTAT136650.013.8489231
GTATAAT138600.013.8256121
TACACTG84600.013.8201445
GTATTGG118050.013.7753511
ACTGTGC80050.013.7063548
TATACAG106200.013.6049495
GTAATAC81300.013.5051363
CTACACT83300.013.4658154
GTATAAG85350.013.314871
TATACCG62950.013.2881575
TAGACTG62100.013.24043755
TATACTA176750.013.14913755
Produced by FastQC (version 0.11.2)