FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l06n02_111.3520000006b201.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l06n02_111.3520000006b201.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9478881
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG62150.019.2703065
GTATAGG50950.018.6642231
CTATACT68600.018.567414
TATACCG31900.017.4310845
TTATACT77050.017.2096584
TAATACT77000.017.159114
TATACAG53850.017.033385
ATAATAC69800.016.6825643
GTATAAT75000.015.785641
GTATTAT70550.015.7704091
ACTGTGC42300.015.6079888
ATTATAC68200.015.3317043
TATACTT78800.015.0779745
GTATTAG46450.015.04721
GTATATA141750.014.99369051
TAGACTG33450.014.9184055
GTATTAA65500.014.8811551
TATACTA95650.014.8067765
TAATACA66100.014.5960464
ATATACT115800.014.5289884
Produced by FastQC (version 0.11.2)