FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l06n02_103.3520000006b03a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l06n02_103.3520000006b03a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23120042
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG152900.018.246065
TTATACT218450.016.8836024
CTATACT175100.016.8291034
TAATACT229550.016.6676354
TAGACTG74250.016.1303065
ACTGTGC104050.016.1140698
GTATTAT201400.015.1097541
GTATAAG119600.015.1073841
TCTATAC131300.014.9142063
TACACTG109200.014.8847665
CTACACT106750.014.5146024
TATACAG135250.014.3722425
ATACTGT162000.014.3673046
GTATAGG102750.014.1604311
TACACCG68900.014.0028145
CCTATAC107350.013.9911263
TATACTT230750.013.9851325
ATAATAC195200.013.9765423
ATTATAC195250.013.948623
CTGTGCA138950.013.7412739
Produced by FastQC (version 0.11.2)