FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l06n01_111.3510000006b204.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l06n01_111.3510000006b204.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9478881
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG61900.018.4161435
GTATAGG48600.018.3822671
CTATACT65950.018.077924
TAATACT77350.017.3172264
TTATACT77050.016.7681754
ACTGTGC45000.016.571638
GTATTAT65300.016.0826111
TATACAG58550.015.9814955
CCTATAC48350.015.5224983
GTATAGA51500.015.3171621
CTAATAC48350.015.1295233
TAGACTG34600.015.1006185
ATAATAC67000.015.0301073
GTATAAT71500.014.8209591
TCTATAC50050.014.710543
ATTATAC71850.014.6766593
GTATTGG60550.014.6759061
TACACTG45100.014.6391675
TAAGACT36850.014.5656724
GTATATA138200.014.5104831
Produced by FastQC (version 0.11.2)