FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l06n01_104.3510000006b0a7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l06n01_104.3510000006b0a7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4387812
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG30100.021.9342465
ACTGTGC19000.018.4991828
ATACTGT28900.018.2431376
TAGACTG15700.017.849535
TTATACT44100.017.556314
TACTGCG8400.017.5289867
GTATAGG20500.016.9217931
CTATACT32600.016.9014784
GTATAAG24750.016.5120331
GACTGTG12800.016.3274047
GTATAGA27700.016.1259541
GTGTAAG14600.015.9485261
TATACTC36450.015.7674785
ACAGTGC22300.015.7616348
ATTATAC36000.015.7015883
CCTATAC21300.015.6105263
TAGACCT15850.015.58326154
TAATACT40900.015.5620144
ACTGTGT22350.015.5138548
GTATTAG24550.015.4851651
Produced by FastQC (version 0.11.2)