FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l06n01_103.3510000006b03d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l06n01_103.3510000006b03d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23120042
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG153000.018.5024555
CTATACT169600.016.7198874
TAATACT233200.015.9280684
TTATACT224300.015.8188964
ACTGTGC103050.015.671188
TAACACT115950.014.8703364
TAGGACT102250.014.6329574
TATACAG141100.014.6095645
GTATAAG114550.014.6028381
TACACTG106100.014.4597795
GTATTAG128050.014.287981
TCTATAC138950.014.2550563
TAAGACT102400.014.194054
TAGACTG74950.014.0687635
CCTATAC105200.013.9970793
GTATAGG107700.013.9872791
GTATTAC117400.013.9649921
TATACTC187550.013.9036815
GGACCGT52750.013.6864856
GTAATAC115750.013.6241233
Produced by FastQC (version 0.11.2)