FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l05n01_78.3510000006b354.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l05n01_78.3510000006b354.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15480110
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG94500.018.5974145
CTATACT97800.017.5822074
TAATACT118800.017.2731294
TTATACT120300.016.7813554
ATAATAC107450.016.7116723
TCTATAC79500.016.611633
TAGACTG51900.016.3820515
TACACTG77900.016.036185
TATACAG96100.016.0141665
GTATATA219600.015.9935371
ATTATAC107400.015.9675213
GTATTAT116500.015.7060591
TATACCG50300.015.2978255
GTATTGG110800.015.2701261
GTATAAT113350.015.0523851
CTACACT71650.015.0491984
GTATAGA81700.015.0082511
GTATAGG72900.014.9945261
TATACTA141500.014.7028095
TACACAG68900.014.6150165
Produced by FastQC (version 0.11.2)