FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l05n01_75.3510000006b255.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l05n01_75.3510000006b255.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17298131
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG108100.023.0821761
CTATACT139850.021.6364774
TATACTG107050.020.676765
CCTATAC114600.019.9390833
TAATACT145400.019.699834
TTATACT148700.019.102924
TATACAG108000.018.8676035
TATACTA190600.018.5410045
TATAGGG104550.018.2209632
GTATTAT135200.017.8578911
ATAATAC130000.017.3943563
GTATAGA92350.017.3434751
GTATATA249600.016.6992951
ATTATAC131600.016.5691993
TCTATAC85200.016.504293
GTATAAT136200.016.4007571
GTAATAC85950.016.3602733
TAGACTG61050.016.183075
CCCTATA114600.016.1256052
GTATAAG86150.015.9987421
Produced by FastQC (version 0.11.2)