FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l05n01_69.3510000006b13c.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l05n01_69.3510000006b13c.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30118769
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG215850.024.4179231
TATACTG203450.023.4867865
CTATACT277650.022.463334
TAATACT267900.020.000624
CCTATAC223650.019.8814133
TTATACT270150.019.464794
TATAGGG200450.019.220332
ATACTGT217850.018.4020736
GTATTAT241450.018.0497551
TAGACTG105150.017.8431345
CCCTATA206350.017.6347922
ATAATAC234850.017.395953
TATACTA367750.017.2817125
ACTGTGT167500.017.1278958
ATTATAC234000.016.9313073
GTATAAT245650.016.7544571
TATACAG195600.016.707175
GTATTAG149600.016.5196551
TACACTG143150.016.4910535
ACTGTGC147800.016.4542248
Produced by FastQC (version 0.11.2)