FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l04n02_145.3520000006b054.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l04n02_145.3520000006b054.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24648700
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG157400.024.1963881
CTATACT203150.021.4511414
TATAGGG146150.020.230632
CCTATAC172800.020.1593973
TATACTG144500.018.6796115
CCCTATA163400.017.2512452
TAGACTG81800.017.1959325
TATACTA268000.016.7920045
TACACTG112450.016.7348985
TATACAG140100.016.349195
ACTGTGC115150.016.0473678
TAGACAG85350.015.9795935
GTATTGG167400.015.8773921
TATACCG81750.015.6950735
TCTATAC122050.015.3807183
GTGTAGG101000.015.06438351
ATAGGGA164600.014.7539523
GTATATA336100.014.6276571
CTACACT113600.014.5579034
TAGGGAT168500.014.5246354
Produced by FastQC (version 0.11.2)