FastQCFastQC Report
Tue 25 Oct 2016
C98UFACXX_l04n01_154.3510000006b211.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l04n01_154.3510000006b211.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19624700
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG103650.021.5031381
CCTATAC107750.019.3971923
CTATACT142600.019.3533784
TAGACTG66650.018.4581265
TATACTG119800.018.2384975
TATACCG61500.016.8371835
CTACACT90050.016.4577734
TATAGGG100850.016.1557962
TACACTG93550.015.9431395
GTATTGG135650.015.9400581
ACTGTGC88400.015.8507578
GTGTAGG80900.015.4491831
TATACAG107750.015.2527045
TAGACAG65250.015.068775
TACACCG65950.014.9808545
TATACTA195100.014.5833595
TCTATAC93500.014.5297433
GTATATA260950.014.3322941
TACACAG83950.014.2583045
CCTACAC80850.014.159263
Produced by FastQC (version 0.11.2)