FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l03n02_128.3520000006b429.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l03n02_128.3520000006b429.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26402696
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACT228350.020.7619514
TATACTG169600.019.859045
CCTATAC159450.019.6038653
GTATAGG140450.019.524851
TACACTG125050.017.6267455
TAGACTG81850.017.2955915
TAGACAG85000.016.7664155
ACTGTGC117100.016.7525468
CTACACT122300.016.1198254
CCAGGAC93150.015.7585383
CCCTATA153750.015.6700562
ATACTGT178800.015.5151236
ACAGTGC130500.015.4327398
CCTACAC99200.015.1805633
TACACAG113700.015.1664525
GGACCGT59900.015.1466446
GTATAGA168750.015.1239131
TATACAG153650.015.1186895
TTATACT265550.015.1164254
TGGACTG115750.014.9799285
Produced by FastQC (version 0.11.2)