FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l03n02_122.3520000006b1cc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l03n02_122.3520000006b1cc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26708350
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG185750.023.3854891
CTATACT238550.021.865574
TATACTG176250.020.7268985
CCTATAC200350.020.4862423
TATAGGG177500.018.847042
TAATACT224250.018.2181344
TATACAG176850.017.8629725
CCCTATA188650.017.0781862
TTATACT229950.017.0641464
GTATATA402500.017.014811
TATACTA319050.016.8399565
GTATTAT201900.016.8305681
TAGACTG97300.016.7462835
TCTATAC141950.016.732953
GTATTAG130100.016.6577591
ACTGTGC135850.016.643068
ATAATAC193750.016.623633
ATACTGT177650.016.3641726
TACACTG131700.016.1956235
GTATAGA153150.015.7022751
Produced by FastQC (version 0.11.2)