FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l03n01_126.3510000006b347.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l03n01_126.3510000006b347.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20778538
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGACTG67600.021.0772955
GTATAGG112750.020.9703711
CCTATAC122000.020.8411943
TATACTG130150.020.6263665
CTATACT178100.020.3765874
GTGTAGG79100.018.1331671
TACACTG96300.018.0291885
ACTGTGC95750.017.7385628
CTAGACT78850.017.4724484
ACAGTGC105150.016.9155738
ATACTGT137150.016.7872146
TAATACT198250.016.7800644
CTACACT89650.016.5544954
CCCTATA122650.016.4842322
TAGGACT82300.016.3997634
TAGACAG69250.016.1466795
GTATTGG142000.016.0983751
CCTACAC76500.016.0327953
TATAGGG112500.016.0299592
TTATACT197400.015.9444494
Produced by FastQC (version 0.11.2)