FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l03n01_122.3510000006b1cf.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l03n01_122.3510000006b1cf.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26708350
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACT233650.023.9556794
GTATAGG179550.023.9256321
CCTATAC189950.022.9909923
TATACTG176700.020.774125
TAATACT220400.020.1948974
TATAGGG171000.020.0451972
CCCTATA174900.018.5751482
TAGACTG95250.018.1299135
TATACTA320950.018.0085325
TTATACT227750.017.7999924
TATACAG167600.017.7919145
ATAATAC185800.017.4553363
GTATTAT195100.017.3454571
ATACTGT171400.016.9845476
TCTATAC140650.016.8964393
GTATATA389550.016.800041
TATACCG93650.016.6763045
GTATAAG124800.016.4938071
GTATTAG124350.016.463531
ACTGTGC131500.016.0384128
Produced by FastQC (version 0.11.2)