FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l03n01_121.3510000006b149.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l03n01_121.3510000006b149.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21472806
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG154050.026.8598271
CTATACT190200.023.5978724
CCTATAC164650.022.7449873
TATAGGG145350.021.8427432
TATACTG138850.021.0346015
TAATACT177600.019.732974
CCCTATA152950.019.441782
TTATACT178950.019.1780514
TATACTA267150.018.9334245
TAGACTG75950.018.5130525
GTATTAT153450.018.0737381
ATTATAC152900.017.5836983
TAGGGAT159650.017.3302234
ATAATAC153000.017.2799433
ATACTGT139300.017.2746246
GTATTAG103700.017.2545811
ACTGTGC103850.017.2195688
ATAGGGA155150.017.1845913
GTATATA303450.017.1551971
TATACAG133550.016.6051755
Produced by FastQC (version 0.11.2)