FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l02n02_90.3520000006b17c.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l02n02_90.3520000006b17c.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32973939
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG172450.017.9700581
CTATACT220150.017.7389184
TATACTG182200.017.4440695
CCTATAC177250.016.1637943
ACTGTGC143650.015.1770568
TAGACTG107900.014.6619875
TATAGGG163750.013.8708042
TACACTG148050.013.7663545
GTGTAGG136850.013.6841081
TAATACT233400.013.6786244
TATACTA295200.013.6473885
TAGACAG110300.013.5676655
TTATACT239000.013.5171474
TATACAG177450.013.4667275
GTATATA384600.013.4210231
TCTATAC151150.013.2967183
CTACACT146150.013.1327764
GACTGTG98150.012.9701817
GTATAAG137600.012.9532261
TACACAG134750.012.9039425
Produced by FastQC (version 0.11.2)