FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l02n01_95.3510000006b1f6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l02n01_95.3510000006b1f6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13355448
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG58800.016.8894651
TAGACTG42350.016.3735585
TATACTG75950.015.94615655
CTATACT74200.015.0422954
TACACTG61600.014.8805925
GTATTGG110200.014.0135671
CTACACC73300.013.6070964
CTACACT60300.013.5475654
CCTATAC55800.013.3640083
GTCTAGG39500.013.2325181
ACTGTGC58150.013.2314468
TACACCG44450.013.1424695
TATTGGG112950.012.9519682
TATACAG71950.012.9380525
TATACCG36900.012.7424355
GTACCGT34700.012.5921636
TTATACT92500.012.5798214
GTATATA156450.012.5132061
GCTACAC61200.012.4952733
GTGTAGG59350.012.4096031
Produced by FastQC (version 0.11.2)