FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l02n01_102.3510000006b360.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l02n01_102.3510000006b360.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30556443
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG172350.019.3254151
CTATACT229150.019.151164
TATACTG170900.018.6195855
TAGACTG103200.016.981815
CCTATAC194150.016.4886053
TATACTA300050.015.2588095
TTATACT224800.014.9793474
TAATACT219650.014.5305154
GTATAGA144850.014.4001851
TATAGGG169350.014.3597272
CCCTATA185600.014.30524352
TATACAG168500.014.2622445
ACTGTGT150550.014.1014588
GTATTGG182000.014.0192561
ACTGTGC136600.013.9421888
TAGGACT126450.013.7093534
GTATATA364250.013.5922141
ATACTGT183850.013.5622876
GTATTAG129250.013.4914171
TACACTG134400.013.46365455
Produced by FastQC (version 0.11.2)