FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l01n02_67.3520000006b27b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l01n02_67.3520000006b27b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13604101
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACT124900.021.9537544
CCTATAC94300.020.460873
TATACTG90500.020.374035
GTATAGG83300.019.4640521
TAGACTG46050.019.0913185
ACTGTGC66000.018.2798588
TTATACT146950.017.7864194
TAATACT156100.017.2309384
CTACACT66200.016.7260484
ATACTGT93600.016.4967176
CTAATAC79100.016.4620483
CTGTGCG34500.016.2453259
CCCTATA83900.015.6969212
TACTGTG76350.015.6799547
TAGACAG45950.015.6165555
TACACTG64500.015.4722475
TAGGACT61050.015.4125644
ATAATAC124000.015.4068593
GTATAGA91750.015.2876191
TATACAG86900.015.2026335
Produced by FastQC (version 0.11.2)