FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l01n02_62.3520000006b0e7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l01n02_62.3520000006b0e7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10167598
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG72950.022.1482545
GTATAGG55550.019.6851651
CTAGACT43550.018.877474
CTATACT93450.018.713474
TTATACT114850.018.6608494
CTGTGCG22750.018.372549
TACACTG49200.018.1584425
TAATACT124000.018.1269724
TAAGGCT45750.018.0735724
ATACTGT76150.017.9063036
ACTGTGC50950.017.8065838
CTACACT49550.017.3588434
TAGACTG33550.017.2803755
CAGGACT30600.017.2380224
CTAACCT47100.017.1519644
TTAACCT62150.016.8216044
TAGAGGT50700.016.6839124
TTACACT62800.016.4961534
TCTAACC47150.016.428593
TAAGACT52450.016.399064
Produced by FastQC (version 0.11.2)