FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l01n01_68.3510000006b2f5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l01n01_68.3510000006b2f5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30523711
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG204350.020.334095
TTATACT256800.019.2530884
CTATACT225850.019.1576824
TAATACT260050.018.7202534
GTATAGG166150.018.102361
TATACAG197950.017.872785
TAGACTG115750.017.8467675
GTATTAT242150.017.8169441
CCTATAC168300.017.7226243
ATAATAC234850.017.635123
TATACCG106200.017.2158135
ACTGTGC152000.017.2148918
GTATAAT244400.016.9530221
ATTATAC235950.016.7074663
GTATATA464700.016.0735471
GTATTAG154550.015.9869721
TACACTG154250.015.947625
TCTATAC165150.015.7886973
TAGACAG102750.015.4367545
GTATTAA213800.015.3124041
Produced by FastQC (version 0.11.2)