FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l01n01_67.3510000006b27e.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l01n01_67.3510000006b27e.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13604101
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG85400.021.53251
TATACTG99450.020.914495
CTATACT122850.020.025444
TAATACT148150.018.977874
CCTATAC87550.018.6069413
TAGACTG46500.018.2800755
TTATACT147600.017.761524
ACTGTGC65600.017.5185858
TATACCG46450.017.0729565
TAGACAG48050.016.9985925
TATAGGG83650.016.92032
TAGGACT57950.016.8826734
TATACAG86500.016.6342965
ATACTGT98550.016.5277546
GTATTAG83600.016.2555311
TCTATAC87400.016.247883
CTGTGCG33100.016.2120519
TACACTG67000.016.1598745
GACTGTG39400.015.668767
ATAATAC127300.015.6322913
Produced by FastQC (version 0.11.2)