FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l01n01_66.3510000006b1e9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l01n01_66.3510000006b1e9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28750824
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG204450.020.8819925
TAGACTG97000.019.3875475
TACACTG142500.018.5626375
CTATACT244900.018.4240364
ATACTGT199450.018.3099486
ACTGTGC140150.018.0609058
TTATACT320500.017.5902754
GTATAGG149350.017.4669281
TAATACT334550.017.2916414
GTATTGG240600.016.984481
CTGTGCG70200.016.912529
CCTATAC153950.016.8758893
TATACCG101250.016.6507075
CTACACT138350.016.4782854
TATACAG181850.015.956125
ACTGTGT155050.015.7739658
TAGACAG97850.015.5791435
ACAGTGC155100.015.5239278
AATACTG170250.015.4812215
CTGTGCA203250.015.3978569
Produced by FastQC (version 0.11.2)