FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l01n01_62.3510000006b0ea.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l01n01_62.3510000006b0ea.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10167598
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG76400.024.3662685
CTATACT91600.021.1035274
TAGACTG34450.020.4018155
TTATACT117950.020.2949834
TAGACAG34950.019.1587965
TAATACT119450.018.8472634
ATACTGT76950.018.5759946
ACTGTGT54000.018.5560268
TACACTG52300.018.5235755
TAGGACT44700.018.4883374
CTAGGCT37900.018.1712554
TTACACT65350.018.0244584
ACTGTGC49350.017.9949558
TAAGGCT46000.017.7593364
CTGTGCG23050.017.718379
CCTATAC55150.017.4827963
GTATAGG58850.017.4403691
GACTGTG31950.017.3904697
CTGTACT61050.017.3490334
CTACACT50550.017.1004034
Produced by FastQC (version 0.11.2)