FastQCFastQC Report
Mon 24 Oct 2016
C98UFACXX_l01n01_59.3510000006b04a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC98UFACXX_l01n01_59.3510000006b04a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8859090
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGACTG30450.018.8708765
TATACTG57050.018.729275
TACACTG40550.017.918215
ACTGTGC39250.017.9066188
CTATACT70150.017.6700864
ACAGTGC46800.017.5546348
GTATAGG48300.017.2158161
CTACACT42000.016.8485624
TACACCG27400.016.8118365
CTAGACT36750.016.4124054
CTGTGCG20000.016.3836489
CCTACAC34100.015.8775573
TAAGACT37050.015.766774
TTACACT46250.015.6083764
TTATACT84350.015.5399584
TACACAG39250.015.4868935
TATACAG51550.015.3844415
CTGTGCA59750.015.3394899
ACTGCGC18650.015.277918
CCTATAC52350.015.150713
Produced by FastQC (version 0.11.2)