C98KBACXX_l04n01_nutrinetat_vega30_shahdara_r2o_ln.3510000008b593.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C98KBACXX_l04n01_nutrinetat_vega30_shahdara_r2o_ln.3510000008b593.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19356082
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC	696539	3.598553674240479	TruSeq Adapter, Index 6 (100% over 51bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22710	0.11732746327485076	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCACGC	74665	43.67243	29
GTATGCC	75225	43.624763	45
ACGTCTG	79295	43.562744	15
GCACACG	79680	43.543694	11
TCACGCC	75105	43.350674	30
CACGCCA	75320	43.2568	31
CACACGT	80145	43.232105	12
ACACGTC	80240	43.169712	13
AGCACAC	80435	43.140568	10
CGCCAAT	75600	43.1323	33
CGTATGC	76190	43.03443	44
AGTCACG	76105	42.922733	28
ACGCCAA	75960	42.85384	32
TCGTATG	76575	42.798595	43
TATCTCG	76975	42.744606	39
CACGTCT	80950	42.721596	14
GAGCACA	81535	42.64464	9
CGTCTGA	80960	42.641838	16
CTCGTAT	77125	42.457626	42
TCGGAAG	82285	42.257	3