C98KBACXX_l01n01_nutrinetat_vega17_mh-1_r2y_ln.3510000008b65f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C98KBACXX_l01n01_nutrinetat_vega17_mh-1_r2y_ln.3510000008b65f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17762510
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC	1307943	7.363503243629419	TruSeq Adapter, Index 9 (100% over 51bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAG	31870	0.17942284057827412	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTA	20005	0.11262484862781218	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	138790	44.225563	45
ACGTCTG	142000	43.928314	15
GCACACG	141900	43.853046	11
TCGGAAG	143955	43.695335	3
AGCACAC	142395	43.675323	10
CACACGT	142480	43.67295	12
ACACGTC	142785	43.568634	13
CGTATGC	141015	43.555733	44
AGTCACG	141865	43.513874	28
GATCGGA	144810	43.50537	1
CTCGTAT	142115	43.501537	42
TCGTATG	141285	43.480095	43
ATCGGAA	144890	43.445984	2
CACGTCT	143115	43.44459	14
GTCACGA	142115	43.426735	29
GAGCACA	144265	43.408615	9
CGATCAG	142160	43.30841	33
TCACGAT	142850	43.20632	30
ACGATCA	142460	43.176147	32
CACGATC	142565	43.163292	31