FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l08n01_mj-159-160531.35100000057d8e.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l08n01_mj-159-160531.35100000057d8e.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7363136
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACACG10750.022.81394811
AGTCACG11200.021.49494428
GATCGGA12200.020.6655541
GTCACGT13200.018.74999429
ACACGTC13100.018.72136913
ACGTCTG13850.018.03248615
CACACGT13650.017.96702812
CGTTTCG13050.017.58620333
CACGTCT14200.017.42957314
CGTCTGA14550.017.01007316
GTTTCGG13950.016.61289834
AGCACAC16050.015.56074210
GAACTCC16500.015.54502821
GAGCACA16700.014.9548839
TCCAGTC17550.014.87138725
CCAGTCA19300.013.40636726
CAGTCAC18250.013.19141927
AGAGCAC18750.013.0796418
TCGGAAG21100.012.7959443
CTCGTAT17850.012.60555244
Produced by FastQC (version 0.11.2)