FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l08n01_mj-155-160531.35100000057d07.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l08n01_mj-155-160531.35100000057d07.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8350710
Sequences flagged as poor quality0
Sequence length51
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACACG9300.017.17750511
ACACGTC10650.015.21134213
CACACGT11450.014.34504912
GATCGGA11600.013.7786321
ACGTCTG12650.013.1621215
CACGTCT13450.012.04466914
AGCACAC13950.011.93554210
CGTCTGA14350.011.13239216
TCCAGTC14850.010.90881825
GTATGCC14400.010.62556145
GAGCACA15900.010.6130069
GAACTCC16400.010.42656921
TATCTCG14700.010.40796539
CAGTCAC17450.09.92811927
CCAGTCA17950.09.90225926
AGAGCAC18150.09.2972888
TCGGAAG19200.09.1403973
CACTAGC15800.09.1138631
CGTATGC17000.09.00020644
ACTAGCT18050.08.85035332
Produced by FastQC (version 0.11.2)