FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l08n01_mj-151-160531.35100000057c15.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l08n01_mj-151-160531.35100000057c15.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7356353
Sequences flagged as poor quality0
Sequence length51
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACACG10850.023.0181511
ACACGTC12400.020.6852313
CACACGT12850.019.4355612
GTCACAC13150.018.6500929
GATCGGA13650.018.6348861
ACGTCTG14200.018.53850615
CACGTCT14000.018.16049214
AGCACAC15150.016.93048710
GAGCACA16400.016.3259099
CGTCTGA15750.016.1425516
GAACTCC16400.016.05141621
CAGTCAC16700.015.08943127
AGAGCAC18850.014.5619578
AGTCACA17350.014.26476128
GTATGCC16900.014.24693745
TCCAGTC18400.013.81757825
TCGGAAG19800.013.6360123
CCAGTCA19200.013.12466226
CGTATGC19050.012.992496544
GTCTGAA20650.012.85681117
Produced by FastQC (version 0.11.2)