FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l07n01_dw-ctl11-160531.35100000057e06.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l07n01_dw-ctl11-160531.35100000057e06.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9287617
Sequences flagged as poor quality0
Sequence length51
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACACG9550.013.90045211
CACACGT12000.012.37493612
ACACGTC12150.011.48142213
GTCACAC12100.010.9708429
ACGTCTG13200.010.738523515
CACGTCT13750.010.47261714
GATCGGA13350.010.2848331
CGTCTGA14750.09.61006816
AGCACAC14350.09.40771910
GAACTCC17300.08.84364721
TATCTCG15650.08.48224741
GAGCACA17250.08.0868279
CAGTCAC17950.08.02211327
CACACTG17700.07.754030731
TCGTATG21150.07.447331445
AGTCACA19850.07.36760128
CTCGTAT19950.07.105609444
CCAGTCA20450.07.041414726
TCCAGTC19600.07.002401425
GTCTGAA21550.06.890730417
Produced by FastQC (version 0.11.2)