C8CR7ACXX_l05n01_sea220.3510000005806e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8CR7ACXX_l05n01_sea220.3510000005806e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4699493
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTATG	110452	2.350296085130885	TruSeq Adapter, Index 18 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCCGC	12790	42.977615	33
ACGTCCG	12940	42.8098	32
TCGTATG	13180	42.523975	45
TCCGCAC	12850	42.514294	35
GTCCGCA	12915	42.491962	34
ACACGTC	13310	42.226967	13
CACGTCC	13120	42.20532	31
GCACACG	13415	42.099064	11
CCGCACA	12985	42.08962	36
AGTCACG	13350	42.08359	28
CTCGTAT	13280	42.017395	44
ACGTCTG	13375	41.971287	15
CGTCTGA	13395	41.95901	16
CGCACAT	13100	41.926235	37
TCACGTC	13260	41.911095	30
GTCACGT	13325	41.892384	29
CACGTCT	13460	41.689526	14
CACACGT	13590	41.48984	12
CAGTCAC	13600	41.260365	27
ACTCCAG	13555	41.230915	23