FastQCFastQC Report
Mon 6 Jun 2016
C8CR7ACXX_l05n01_sb6.35100000057c3f.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC8CR7ACXX_l05n01_sb6.35100000057c3f.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15725379
Sequences flagged as poor quality0
Sequence length51
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCACGC16350.07.018202329
GTATGCC22500.05.99991345
CGTATGC20050.05.94748844
GCACACG26900.05.938745511
ACGTCTG27700.05.442142515
AGTCACG21050.05.344306528
CTCGTAT24350.05.174446642
ACACGTC30250.05.057858513
CGTCTGA30450.05.02454216
TCGTATG25150.05.00983643
Produced by FastQC (version 0.11.2)