C8CR7ACXX_l04n01_sea210.351000000580d8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8CR7ACXX_l04n01_sea210.351000000580d8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8962956
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCC	472168	5.2679941751359705	TruSeq Adapter, Index 4 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	55850	43.739677	11
ACACGTC	55710	43.67875	13
CACACGT	55865	43.670815	12
ACGTCTG	55825	43.571434	15
CACGTCT	55805	43.53585	14
GTATGCC	55090	43.455147	45
CGTCTGA	56140	43.330963	16
AGCACAC	56465	43.28719	10
CGTATGC	55590	43.063328	44
GATCGGA	57315	43.051487	1
CAGTCAC	56235	43.022907	27
CTCGTAT	55405	42.973713	42
GAACTCC	56385	42.95913	21
ACTGACC	55660	42.90215	32
CCAGTCA	56275	42.864384	26
TCCAGTC	56370	42.81091	25
CTGACCA	55545	42.80011	33
TCGTATG	56040	42.77112	43
ACTCCAG	56485	42.759598	23
CGGAAGA	57775	42.755775	4