C8CR7ACXX_l04n01_sea209.35100000058052.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C8CR7ACXX_l04n01_sea209.35100000058052.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6005185
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCC	361802	6.024826878772261	TruSeq Adapter, Index 3 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	39620	43.983086	11
GTATGCC	39255	43.966564	45
ACACGTC	39530	43.946255	13
ACGTCTG	39520	43.939564	15
CACGTCT	39565	43.901695	14
ACTTAGG	39000	43.886158	32
CACACGT	39660	43.87028	12
CACTTAG	39055	43.864677	31
CGTCTGA	39675	43.767902	16
CGTATGC	39480	43.702774	44
GATCGGA	39855	43.61899	1
AGCACAC	40090	43.517956	10
AGGCATC	39090	43.516033	36
TCGGAAG	39925	43.513645	3
CTCGTAT	39615	43.461517	42
GGCATCT	39150	43.45509	37
CAGTCAC	39765	43.41495	27
TCGTATG	39865	43.33955	43
TTAGGCA	39340	43.300972	34
CCAGTCA	39825	43.293045	26